Modification to the scripts from today (3-4-15)!ΒΆ
Please copy and paste the appropriate commands into your terminal on the HPCC to fix my mistake. Sorry everyone!
If you are in the LB vs Indole group:
cp /mnt/research/mmg434/LreuteriRNAseqData/LreuteriAnalysisScriptLBvsIndole.sh ~
module load powertools
intel14-phi
qsub LreuteriAnalysisScriptLBvsIndole.sh
If you are in the LB vs Commensal group:
cp /mnt/research/mmg434/LreuteriRNAseqData/LreuteriAnalysisScriptLBvsComm.sh ~
module load powertools
intel14-phi
qsub LreuteriAnalysisScriptLBvsComm.sh
If you are in the LB vs EHEC group:
cp /mnt/research/mmg434/LreuteriRNAseqData/LreuteriAnalysisScriptLBvsEHEC.sh ~
module load powertools
intel14-phi
qsub LreuteriAnalysisScriptLBvsEHEC.sh
These will run now. Something weird happened when I uploaded the files to the HPCC.