Welcome to the MMG 434 RNA-seq tutorial¶
Contents:¶
| Day | Module |
|---|---|
| Fri 02/27 | Install software and use FileZilla to transfer files |
| Fri 02/27 | RNA-seq background information, basic Linux/Unix commands, Trimmomatic, and FastQC |
| Mon 03/02 | Align sequences with Bowtie and count gene features with HTSeq |
| Wed 03/04 | Analyzing L. reuteri data |
| Wed 03/04 | Modification to the scripts from today (3-4-15)! |
| Fri 03/05 | Differential gene expression analysis with edgeR |
| Mon 03/16 | FastQC files |